Changes in version 0.99.4                        

  - Documented the return value on the class page, clearing the
    BiocCheck warning about a missing alue section.
  - Wrapped the last over-long source line.

                       Changes in version 0.99.3                        

  - Version bump only, to re-run the Bioconductor checks after a
    transient bioconductor.org outage (HTTP 504) aborted BiocCheck. No
    code changes.

                       Changes in version 0.99.2                        

  - Split simulateBreeding() into helpers so no function exceeds the
    recommended length.
  - Wrapped over-long source lines and added the QualityControl
    biocView.

                       Changes in version 0.99.1                        

  - Removed a non-standard field from DESCRIPTION.
  - Added citation metadata (inst/CITATION and CITATION.cff).

                       Changes in version 0.99.0                        

First submission to Bioconductor.

  - The BreedingExperiment class, extending RangedSummarizedExperiment,
    holds marker genotypes, phenotypes, a pedigree and marker
    coordinates in one object.
  - Relationship matrices: Amatrix() (pedigree), Gmatrix() (genomic),
    Dmatrix() (dominance) and Hmatrix() (single step, combining pedigree
    and genomic information so genotyped and ungenotyped individuals can
    be analysed together).
  - Quality control with filterMarkers() and imputeMarkers(), plus
    alleleFrequency(), inbreeding() and sortPedigree().
  - demoBreeding, a simulated five-generation population with
    ungenotyped ancestors, and simulateBreeding() for generating your
    own.